## ceRNAnetsim

ceRNAnetsim helps to understanding complex miRNA:target interactions with the network based approach. It utilizes the amounts of miRNAs and their targets and interaction parameters optionally.

## Installation

Installation of ceRNAnetsim:

if (!requireNamespace("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("ceRNAnetsim")

library(ceRNAnetsim)

## Example

data("minsamp")

minsamp

priming_graph(minsamp,
competing_count = Competing_expression,
miRNA_count = miRNA_expression)


## Local Files

The ceRNAnetsim provides various datasets for experimenting with package functions. These are:

• minsamp : the minimum sample consists of 2 miRNAs and 6 genes which are targeted by them. new_counts is a helper dataset for minsamp.
• midsamp : middle-sized sample is a network of 4 miRNAs and 20 competing target genes.
• huge_example : this dataset is comprised of a large network which incorporates three datasets: